Protein Structure Prediction by Evolutionary Multi-objective Optimization: Search Space Reduction by Using Rotamers

نویسندگان

  • José C. Calvo
  • Julio Ortega
  • Mancia Anguita
  • José M. Urquiza
  • J. P. Florido
چکیده

The protein structure prediction (PSP) problem is considered an open problem as there is no recognized ”best” procedure to find solutions. Moreover, this problem presents a vast search space and the analysis of each protein conformation requires significant amount of computing time. We propose a reduction of the search space by using the dependent rotamer library. Also this work introduces new heuristics to improve the multi-objective optimization approach to this problem.

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تاریخ انتشار 2009